BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002H10LP1|AL425040
(1078 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1256 2065 0.0
>3x_Contig1256
Length = 6519
Score = 2065 bits (1041), Expect = 0.0
Identities = 1070/1075 (99%), Gaps = 4/1075 (0%)
Strand = Plus / Minus
Query: 1 actcgctacacatggctctcgattgtacttctctatttctcggtttattggctggcgtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3789 actcgctacacatggctctcgattgtacttctctatttctcggtttattggctggcgtgc 3730
Query: 61 tttcaaaataccccgctagtgacaagtatccttttgcgttgggctacttagagactattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3729 tttcaaaataccccgctagtgacaagtatccttttgcgttgggctacttagagactattg 3670
Query: 121 caggtttcacaaatggggtcttgttgattggaattgttattgaaattttcattgaatcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3669 caggtttcacaaatggggtcttgttgattggaattgttattgaaattttcattgaatcat 3610
Query: 181 tccaaagaatatttaatccagtcacaatactaggaactaccgagttgttagtagtttcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3609 tccaaagaatatttaatccagtcacaatactaggaactaccgagttgttagtagtttcta 3550
Query: 241 tcctagggttacttgtaaacgttgtaggtctatgtgcatttgaccatggccatgctcacg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3549 tcctagggttacttgtaaacgttgtaggtctatgtgcatttgaccatggccatgctcacg 3490
Query: 301 gcgaacatgaatctaatgacaacatgagaggtatcttccttcatgttttggcagataccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3489 gcgaacatgaatctaatgacaacatgagaggtatcttccttcatgttttggcagataccc 3430
Query: 361 ttggctctgtcggagttatcatatctactttattgaccaagatctttaaatcgcagatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3429 ttggctctgtcggagttatcatatctactttattgaccaagatctttaaatcgcagatat 3370
Query: 421 tcgatccaattgcctcattttttattgcatcgttaatccttctaagctcgctcccattac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3369 tcgatccaattgcctcattttttattgcatcgttaatccttctaagctcgctcccattac 3310
Query: 481 taaagtctacagggtcaagcttgttgttaaaggttgacgacaaaaagcacgctttattga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3309 taaagtctacagggtcaagcttgttgttaaaggttgacgacaaaaagcacgctttattga 3250
Query: 541 aaaacgttttgaatcagattgtgtcaactcctggagtgactggatatacggctccgcgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3249 aaaacgttttgaatcagattgtgtcaactcctggagtgactggatatacggctccgcgat 3190
Query: 601 tttggccagaatctacctcaggaaatagtcatggccattctcatggtcactctcacacat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3189 tttggccagaatctacctcaggaaatagtcatggccattctcatggtcactctcacacat 3130
Query: 661 catcgaactctcatgaagaggagaacaatcactctcatgaaagttcacattcacatacag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3129 catcgaactctcatgaagaggagaacaatcactctcatgaaagttcacattcacatacag 3070
Query: 721 agtctccagtggaagccaagtcaaagagtaattcctctgcaaagccatcgctcgttggtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3069 agtctccagtggaagccaagtcaaagagtaattcctctgcaaagccatcgctcgttggtt 3010
Query: 781 atatccatgtccaatacatagatggagaaaattcaaccatcataaaaaagcgtgtcgaaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3009 atatccatgtccaatacatagatggagaaaattcaaccatcataaaaaagcgtgtcgaaa 2950
Query: 841 gaatatttgagagagcaaatatcaaagtgtggatccaggttgaagcccaaagttctgctt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2949 gaatatttgagagagcaaatatcaaagtgtggatccaggttgaagcccaaagttctgctt 2890
Query: 901 gctggtgtagggccacatccatgaaagaccaggcaattataatatgaaccgttccttatt 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2889 gctggtgtagggccacatccatgaaagaccaggcaattataatatgaaccgttccttatt 2830
Query: 961 gaaataaatataaaatagtacatcctcgacaagctaacgcagcattcatgaaaagaaaaa 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2829 gaaataaatataaaatagtacatcctcgacaagctaacgcagcattcatgaaaagaaaaa 2770
Query: 1021 caattcatgc-aacaaaactatgatac-tatatat-atgtag-attwattagata 1071
|||||||||| |||||||||||||||| ||||||| |||||| ||| ||||||||
Sbjct: 2769 caattcatgcaaacaaaactatgatacttatatataatgtagaattaattagata 2715
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8054
Number of Sequences: 1807
Number of extensions: 8054
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 1078
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1062
effective length of database: 10,329,639
effective search space: 10970076618
effective search space used: 10970076618
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)